# frozen_string_literal: true
module Onebox
module Engine
class PubmedOnebox
include Engine
include LayoutSupport
matches_regexp(/^https?:\/\/(?:(?:\w)+\.)?(www.ncbi.nlm.nih)\.gov(?:\/)?\/pubmed\/\d+/)
private
def xml
return @xml if defined?(@xml)
doc = Nokogiri::XML(URI.open(URI.join(@url, "?report=xml&format=text")))
pre = doc.xpath("//pre")
@xml = Nokogiri::XML("" + pre.text + "")
end
def authors
initials = xml.css("Initials").map { |x| x.content }
last_names = xml.css("LastName").map { |x| x.content }
author_list = (initials.zip(last_names)).map { |i, l| i + " " + l }
if author_list.length > 1 then
author_list[-2] = author_list[-2] + " and " + author_list[-1]
author_list.pop
end
author_list.join(", ")
end
def date
xml.css("PubDate")
.children
.map { |x| x.content }
.select { |s| !s.match(/^\s+$/) }
.map { |s| s.split }
.flatten
.sort
.reverse
.join(" ") # Reverse sort so month before year.
end
def data
{
title: xml.css("ArticleTitle").text,
authors: authors,
journal: xml.css("Title").text,
abstract: xml.css("AbstractText").text,
date: date,
link: @url,
pmid: match[:pmid]
}
end
def match
@match ||= @url.match(%r{www\.ncbi\.nlm\.nih\.gov/pubmed/(?[0-9]+)})
end
end
end
end